SNP Profiles matching SCA 11

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	GG	TT	CC	TT	CT	AC	CC	AA	CT	AT	GG	AG	CC	TT
1._RUQ_818	_	_	CC	GT	CT	AC	CC	AA	CT	AT	_	AG	CC	TT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	TT	CC	CC	CC	AA	GG	CG	CC	TT	GG	AA	CT	AA	CT
1._RUQ_818	TT	CC	CC	CT	_	GT	CG	CC	_	_	_	_	AA	CT

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AA	AA	TT	TT	GG	CC	AA	TT	CT	GG	AA	CT	X_X	X_X
1._RUQ_818	_	_	_	_	GT	_	_	_	CT	GG	AA	_	X_X	X_X

Input profile: SCA_11

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Dapeng Zhang, 2016

1._ICS_75 RUQ_818

91.7 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP25	2	TcSNP32	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP193	7	TcSNP226	8	TcSNP230	9	TcSNP242	10	TcSNP372
11	TcSNP429	12	TcSNP469	13	TcSNP529	14	TcSNP534	15	TcSNP560
16	TcSNP577	17	TcSNP591	18	TcSNP619	19	TcSNP645	20	TcSNP723
21	TcSNP872	22	TcSNP891	23	TcSNP917	24	TcSNP929	25	TcSNP953
26	TcSNP994	27	TcSNP998	28	TcSNP1060	29	TcSNP1062	30	TcSNP1075
31	TcSNP1144	32	TcSNP1165	33	TcSNP1253	34	TcSNP1270	35	TcSNP1350
36	TcSNP1414	37	TcSNP1442	38	TcSNP1458	39	TcSNP1484	40	TcSNP1520